I think Steve is trying to align the end transmission QPDs, since the arms are locked nicely right now. I noticed that the QPDX pitch and yaw signals were digital zeros. A quick look determined that the QPDX matrix to go from 4 quadrants to 3 degrees of freedom had been filled in for the POS row, but not pitch and yaw. So, I copied the QPDY matrix over to QPDX (so the ordering of the rows and columns is assumed to be the same).
Hopefully this will get us close to centered, but I suppose we ought to check really which quadrant is which, by shining a laser pointer at each quad at each end.